BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008D12LP1|AL425863
(837 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1653 1619 0.0
>3x_Contig1653
Length = 14012
Score = 1619 bits (816), Expect = 0.0
Identities = 834/838 (99%), Gaps = 2/838 (0%)
Strand = Plus / Plus
Query: 1 cattgacgaaaaaggcccaaaactttwattcaggaccagccctcgtgtttatatactgac 60
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 5626 cattgacgaaaaaggcccaaaactttttttcaggaccagccctcgtgtttatatactgac 5685
Query: 61 gaaaattttaaaaaaatgaaaaatggaaagtgaagacgaaaaaaatattacaatgaaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 5686 gaaaattttaaaaaaatgaaaaatggaaagtgaagacgaaaaaaatattacaa-gaaatt 5744
Query: 121 cagagtgcgatagaggacgctggaggacggatgcaagaaaaaaactcataaacatgacag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5745 cagagtgcgatagaggacgctggaggacggatgcaagaaaaaaactcataaacatgacag 5804
Query: 181 cgcatacaaaaacgcaaaaacccagcataataattttgggaggcgttacatgagagtgcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5805 cgcatacaaaaacgcaaaaacccagcataataattttgggaggcgttacatgagagtgcg 5864
Query: 241 ggtaagaaaatgcttcggaaacttgacatcgtttttaacgatagcagttatgatcgtcat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5865 ggtaagaaaatgcttcggaaacttgacatcgtttttaacgatagcagttatgatcgtcat 5924
Query: 301 attcacagtagaacggaacgggtcctcttgatagtggtggtactaggcgcaactggtgta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5925 attcacagtagaacggaacgggtcctcttgatagtggtggtactaggcgcaactggtgta 5984
Query: 361 aatgagtaattgaagatccattacttttccgtgatgcaacagatcagcttcaggcaaaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5985 aatgagtaattgaagatccattacttttccgtgatgcaacagatcagcttcaggcaaaga 6044
Query: 421 aatagggagttacagtttagttcattctcgtgatttcctgcttactgttctttccccctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6045 aatagggagttacagtttagttcattctcgtgatttcctgcttactgttctttccccctt 6104
Query: 481 gcaataagagtattagaaggaggtgctaatcctttttgcttggtcatttttttttatctc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6105 gcaataagagtattagaaggaggtgctaatcctttttgcttggtcatttttttttatctc 6164
Query: 541 gtagttgcgttacaaaaaaaaaatccatgtagagctgtttacaaccaaacacagggaaga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6165 gtagttgcgttacaaaaaaaaaatccatgtagagctgtttacaaccaaacacagggaaga 6224
Query: 601 aatacagccagatagtatagtgatgtatgggtgtatagtcacgttcgacgaagttattct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6225 aatacagccagatagtatagtgatgtatgggtgtatagtcacgttcgacgaagttattct 6284
Query: 661 gatactctatgtgtgcgcattagtaaagggaaaagttagtgactcgaataacgcccgtga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6285 gatactctatgtgtgcgcattagtaaagggaaaagttagtgactcgaataacgcccgtga 6344
Query: 721 accacaatatgattagttaatcaaaaatcttcatcaagattgggggagattcctgttttg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6345 accacaatatgattagttaatcaaaaatcttcatcaagattgggggagattcctgttttg 6404
Query: 781 tggacgcc-aaaccgcaaaattttggagggttgcttccgttgtcgggtaacttattgt 837
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6405 tggacgccaaaaccgcaaaattttggagggttgcttccgttgtcgggtaacttattgt 6462
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7999
Number of Sequences: 1807
Number of extensions: 7999
Number of successful extensions: 81
Number of sequences better than 1.0e-20: 1
length of query: 837
length of database: 10,358,551
effective HSP length: 16
effective length of query: 821
effective length of database: 10,329,639
effective search space: 8480633619
effective search space used: 8480633619
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)